Cheap flights from Heraklion to Prague
✈️ Fares in September 2026 start from €72 — found by real travellers in the last 48 hours.
Compare all Heraklion → Prague flights
Cheapest day to fly in September 2026
| Date | From | Stops | |
|---|---|---|---|
| Tue 1 Sept | €72 | Direct | Book → |
| Wed 2 Sept | €86 | Direct | Book → |
| Tue 8 Sept | €116 | 1 stop | Book → |
| Mon 14 Sept | €122 | 1 stop | Book → |
| Thu 17 Sept | €97 | 1 stop | Book → |
| Wed 23 Sept | €87 | 1 stop | Book → |
| Thu 24 Sept | €88 | 1 stop | Book → |
Popular flights from Heraklion
Heraklion to London · Heraklion to Paris · Heraklion to Rome · Heraklion to Milan · Heraklion to Berlin · Heraklion to Munich · Heraklion to Frankfurt · Heraklion to Amsterdam · Heraklion to Madrid · Heraklion to Barcelona · Heraklion to Lisbon · Heraklion to Vienna
Flights to Prague from other cities
Frequently asked questions
How much is a flight from Heraklion to Prague?
Cached market fares for September 2026 start from €72 one-way. Prices are found by real travellers in the last 48 hours and confirmed at checkout.
Which airlines fly from Heraklion to Prague?
Recent fares on this route are offered by QS, GQ, U2 and others. ScanFlyGo compares 1,200+ airlines and agencies.
What is the cheapest day to fly from Heraklion to Prague?
ScanFlyGo shows the cheapest fare for each day of September 2026 — check the price table above to pick the cheapest date, then book directly with the provider.
Is Heraklion to Prague a direct flight?
Both direct and connecting options may be available. Use the ScanFlyGo search to filter by stops, airline and time.
Can I track my Heraklion to Prague flight live?
Yes. ScanFlyGo has a built-in live flight tracker with a real-time map, so you can follow your aircraft on the day by flight number.
Does ScanFlyGo charge booking or service fees?
No. ScanFlyGo is a free flight metasearch — we compare fares and send you to the airline or agency to book. The price is confirmed at their checkout with no extra fee from us.
About Heraklion to Prague flights
ScanFlyGo compares Heraklion (Heraklion Airport, HER) to Prague (Vaclav Havel Airport Prague, PRG) fares across 1,200+ airlines and agencies via the Aviasales network. The cheapest fare found for September 2026 is €72. Prices shown are the lowest cached market fares; the final price is always confirmed at the partner's checkout. You can also search the return route Prague → Heraklion, or use the full live search for exact dates, stops, airline filters and a live map to track your flight on the day.
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